Viewing the perfect alignment positions of all Oryza and Pinus small RNAs sequenced by our group

Showing 3.599 kbp from chr8, positions 9,487,971 to 9,491,569

Instructions Instructions Search using a sequence name, gene name, locus, or other landmark. The wildcard character * is allowed. To center on a location, click the ruler. Use the Scroll/Zoom buttons to change magnification and position. Examples: chr2:14357000..14357500, chr2:1553150..1553250, chr6:23207700..23208200, chr8:9084250..9089249, chr1:18465991..18466408, chr1:19743000..19743600, chr1:27396056..27396656.
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Instructions

Search using a sequence name, gene name, locus, or other landmark. The wildcard character * is allowed. To center on a location, click the ruler. Use the Scroll/Zoom buttons to change magnification and position.

Examples: chr2:14357000..14357500, chr2:1553150..1553250, chr6:23207700..23208200, chr8:9084250..9089249, chr1:18465991..18466408, chr1:19743000..19743600, chr1:27396056..27396656.

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Landmark or Region:	Reports & Analysis:
Data Source	Scroll/Zoom: Flip

Overview

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To view a specific track be sure to select the desired box(es) below and hit 'update image'

please direct comments or questions to rmorin at bcgsc decimal ca

This browser hosts the two small RNA data sets described in Morin et al., 2008.

Tracks

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For the source code for this browser, see the Generic Model Organism Database Project. For other questions, send mail to lstein@cshl.org.

$Id: yeast_chr1.conf,v 1.9.4.3.2.3 2006/06/15 15:29:27 scottcain Exp $

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Generic genome browser version 1.68

3-frame translation (forward)	DNA/GC Content	Named gene	rice-smRNA
3-frame translation (reverse)	Genomic Repeat	Noncoding RNAs	rRNAs
6-frame translation	microRNAs	pine-smRNA	tRNAs

Image Width 450 640 800 1024	Key position Between Beneath Left Right	Track Name Table Alphabetic Varying
Highlight feature(s) (feature1 feature2...)	Highlight regions (region1:start..end region2:start..end)	Show grid